PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003812.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 176aa    MW: 20365.3 Da    PI: 10.1642
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003812.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.8e-182976148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT +Ed ll+++++ +G g+W++ a+  g++Rt+k+c++rw++yl
  Cse_sc003812.1_g020.1 29 RGPWTLDEDNLLIQYITCHGEGRWNSLAKSSGLKRTGKSCRLRWLNYL 76
                           89********************************************97 PP
2Myb_DNA-binding43.29e-1483125246
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            g+ +++E++l+++++ ++G++ W++Ia+ ++ gRt +++k++w++
  Cse_sc003812.1_g020.1  83 GNLSPQEQLLILELHSKWGNR-WSKIAHQFP-GRTYNEIKNYWRT 125
                            6779*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MAIKCQIGPL TKSKSDFCFV VEEVGELRRG PWTLDEDNLL IQYITCHGEG RWNSLAKSSG  60
LKRTGKSCRL RWLNYLKPDV KHGNLSPQEQ LLILELHSKW GNRWSKIAHQ FPGRTYNEIK  120
NYWRTKVQKQ AHYLKIDSNS KKFVEALKQF WLPRLLEKVE QSSPSSSSTS TTTVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.15e-75MYB family protein