PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc003982.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 235aa    MW: 26997.6 Da    PI: 9.3394
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc003982.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-2081129355
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                            y+G+r+++ +g+W+AeIrdp     +   r++lg++ taeeAaka+++a+ +++g
  Cse_sc003982.1_g020.1  81 YRGIRRRP-WGKWAAEIRDP-----HqgVRVWLGTYNTAEEAAKAYDKAATRIRG 129
                            9*******.**********7.....336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MCGGAVISDV DPVMKRSRKM TANDLWNEFD TYDDLFDWDI KPPSLFRTTI NNKSTAKHKQ  60
GSKKQTQRSI DKKTKPRKNL YRGIRRRPWG KWAAEIRDPH QGVRVWLGTY NTAEEAAKAY  120
DKAATRIRGN KAKLNFPHPP NTPPTKKLCV ETTDSDHLID HKQSPRPPPL MDQHYLNEQN  180
LTATESMVHE QLAPLPSLVQ FEFNEQISNL ETFLGLEHES SLLNLWALDD LPVTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17288KKTKPRKNLYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-41ERF family protein