PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004025.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 730aa    MW: 79904.9 Da    PI: 6.8917
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004025.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.27.1e-33296353260
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                            dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k
  Cse_sc004025.1_g030.1 296 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHNHPK 353
                            8****************************************.***************85 PP
2WRKY36.21.2e-11499520122
                            ---SS-EEEEEEE--TT-SS-E CS
                   WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                            ldDgy+WrKYGqK+vkg+++pr
  Cse_sc004025.1_g030.1 499 LDDGYRWRKYGQKVVKGNPNPR 520
                            59*******************9 PP
3WRKY50.25e-165405831659
                            TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  16 kgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            k s++  sYY+Cts+gC+v+k+ver+++d k v++tYeg+Hnh+
  Cse_sc004025.1_g030.1 540 KYSKMDVSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHD 583
                            5678889************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    
MGGLDDHGGI IGDWMAPSPS PRSFFAAMLG ETDVGSRTVP EPPKFDNNND GGFTFPGPNR  60
QVMSEIGDKN QSGQMGNQVM KSGEFGEQKP SSRAGLVERM AARAGHNAPR LNTDIVKPSD  120
ASQNQQSQSP YLTIPPGLSP TSLLDSPVFL SNSLAQPSPT TGKFQFPPNG NSNGNGRSSL  180
MFSDSSNRSK DNFFEEPNNT SFAFKPFPNS APFLRGHVSE VNPSPPFMSA QSFQHNEAFA  240
QSEKQFQPQK IEPNQNYSLP IGNLEGSQKH LKEHHDDDAD QRTSGDIANA NSASADDGYN  300
WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSHEGHI TEIIYKGAHN HPKLGPNRRS  360
GNGSSGVLSD MQGDVNEQGG NDVDGGLVWG SNMQHKGSNH WGQENNLEVT SSGLIMQGQN  420
SGQFESSDAV DGSTTFSNDE EEDDRATHGS VSLSYDGEGD ESESKRRKVE AYAADVTGAT  480
RAIREPRVVV QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR LSFCAVLCGL LFNLDVEYFK  540
YSKMDVSYYK CTSTGCTVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHANNNNNNN  600
HTMAAQTLSM QSQLHMPEPS RMQNHMARFQ RPPYGLPGGQ HMGTNQSHGY GFAMNQQRPG  660
GLAQMAMANQ GQQHMGPTPT HGYGYAMNQH LGFMVPKGEP KVEPMSDPGL NLANGATLYQ  720
QMTNRLPLGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-144WRKY family protein