PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004035.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 255aa MW: 28994.6 Da PI: 6.5031

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004035.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.7	1.4e-29	3	53	5	55
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +Wtp+LH++Fv+a++ LGG++kAtPk +l++m+vkgLt++hvkSHLQ+YR+ Cse_sc004035.1_g030.1 3 QWTPDLHTCFVNAIHTLGGPHKATPKLVLHTMDVKGLTISHVKSHLQMYRS 53 6*************************************************7 PP
2	Myb_DNA-binding	47.8	3.4e-15	3	52	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++ +v+a++ lGg+ t+k++ +tm kg+t ++ks++q+y+ Cse_sc004035.1_g030.1 3 QWTPDLHTCFVNAIHTLGGPhkaTPKLVLHTMDvKGLTISHVKSHLQMYR 52 7***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MEQWTPDLHT CFVNAIHTLG GPHKATPKLV LHTMDVKGLT ISHVKSHLQM YRSMKGDFIM 60 QDNIVNQSIG IYRKQAHEDQ HDGFIDHDIF LQTYVQESCP GLIDNPLTVP SKRGIMETEG 120 MHGYWERRIK GKEDIGDHKW QQPHSFSIPH FHFNPFFTHQ KESDFLKISE PENGEHGAFN 180 GMKLRKCGQI IKDEIDEPYD RSGLSLSLSL HHPLVQISNC SSTSGISEEQ STHNLSENSS 240 SKCDVNLDLS IALCH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-22	G2-like family protein