PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004074.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 256aa    MW: 28469 Da    PI: 9.3372
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004074.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.44.3e-07106128326
                            S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                            + +C +far G C+yG  CkF H+
  Cse_sc004074.1_g040.1 106 RNPCINFAR-GACRYGMGCKFVHD 128
                            679******.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MEAYLGKIET TATILASLDS PITNDDLVYY ALEGLSDKYD QVCGIMHHRE TFPDFKTARS  60
MLITEEMRLK NRSLALPVDS TSSSPLVLMT DKGIARNPSN PQVKSRNPCI NFARGACRYG  120
MGCKFVHDSN NKNTHRPIEN KQNSDTEEIV LKLLGRLGIT GNNNPQQIPL SHPNHIASSP  180
SAYSTGPLLY GPPGPMPTAP MLQRAPHLKK IHNPSLRDKK ICYPMLSTLG LFMIPRPGDG  240
IWTQVRVYIL MLMLIV