PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004131.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 415aa    MW: 46719.3 Da    PI: 4.4163
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004131.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind87.61.6e-271859102
                            HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
           HSF_DNA-bind   9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                            +++d+++++l+sws+++nsf+v d++efak +Lpky k+++f SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++
  Cse_sc004131.1_g030.1   1 MVDDPSTDNLVSWSSTNNSFIVRDPHEFAKFLLPKYSKTDKFPSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKT 79 
                            89********************************************************999.........****************** PP

                            XXXXXX CS
           HSF_DNA-bind  97 ikrkks 102
                            i r+k 
  Cse_sc004131.1_g030.1  80 IVRRKP 85 
                            ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MVDDPSTDNL VSWSSTNNSF IVRDPHEFAK FLLPKYSKTD KFPSFVRQLN TYGFRKVDPD  60
RWEFANEGFL RGQKHLLKTI VRRKPASGHT QQSHPQTSCV GACVEVGKFG LEEEVERLKR  120
DKNVLMQELV RLRQQQQTTD NQMQLMAQRL QVMEQKQQQM MSFFAKAVNS PGFLSHFVQQ  180
QNETTKLISE GSKKRRLKQD GVVSNGHNES PHSQIVKYQP MITLGNSSPP SETFSEGSGP  240
GVTVQGQLFL PEVTGDQFPP FEANTDVVAT SPLANGQELP YIPDDLDMVS NDAFIDPDMI  300
PSDIEAVATS PLADGQEFLY TPDDLDMVPN DAFIGPNMHM VPSDIENFLL NTDEEWNSNL  360
LPNPEVDTIQ DMDSIPPVDD YLMQGSEDKP LENASPTGQV QQLTQQMGRI PFFVY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193198KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.14e-91HSF family protein