PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004182.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 188aa    MW: 21835.4 Da    PI: 6.1555
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004182.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind742.7e-232990262
                           HHHHHHHHHCTGGG..TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTE CS
           HSF_DNA-bind  2 Flkklyeiledeel..keliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgF 62
                           Fl+k+y++ledee   ++++sw+e+g+ fvv+ ++ef++++Lp yFkh+nf+SF+RQLn+Y F
  Cse_sc004182.1_g010.1 29 FLSKTYDLLEDEEHirSRIVSWNEEGSGFVVWSPDEFSEQILPIYFKHNNFSSFIRQLNTY-F 90
                           9*********88743389*******************************************.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MAADHPNEPP TTSKRSTVTS FKTKHPAPFL SKTYDLLEDE EHIRSRIVSW NEEGSGFVVW  60
SPDEFSEQIL PIYFKHNNFS SFIRQLNTYF RKGCEHLLME ITRKKCEPSA FPQYLKPSSG  120
DTTSSNNNLQ TPSSSSMEEE NMLLLLDENK NLKRDNMELQ MQIQHYKSLE IKLSECASQY  180
MGSNHQYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-30HSF family protein