PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004314.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 180aa MW: 20496 Da PI: 8.1002

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004314.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	44.2	5e-14	25	56	47	78
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 rfh++sef+eekrsCrrrL++hn+rr k+++ Cse_sc004314.1_g020.1 25 YRFHNMSEFNEEKRSCRRRLSNHNARRWKPNE 56 69*************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MTNMQATNAS ICLVLIILQF VYCWYRFHNM SEFNEEKRSC RRRLSNHNAR RWKPNEEAMR 60 FNPSYSSFYG TESLDVLSHS TGVQLSDVLN MPNLARNRLV PSKGARAEIF DQGYKDSLSS 120 NVDAVDLRLA LSLLSNNSWG SSELDHSMLS SVSTMPHYGT MHAVPHASPL SSQQYWQANQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-10	SBP family protein