PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004315.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 312aa MW: 33994.7 Da PI: 8.7363

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004315.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.8	9.3e-39	72	152	2	82
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssa 82 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +s + Cse_sc004315.1_g020.1 72 APKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALaaaG---AVSHG 152 789******************************************************************7774221...22222 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MDPKTSNQHH SHSHDQVSRF LTIPHPTTTS NNNNKNIMGD TNININNNNN NLKLSEIKED 60 LTTTKKQQQQ LAPKRTSNKD RHTKVEGRGR RIRMPALCAA RIFQLTRELG HKSDGETIQW 120 LLQQAEPSII AATGTGTIPA SALAAAGAVS HGVSISAGLQ HKLDELGNSN NNNISGSCRT 180 TWPMMTRPIS HMANPMWSPT ATPVSGFGYQ SPSSSSVSNL EIDGSNYLQK IAFSGFELPG 240 SNMGQMSFSS ILGNHDHGQQ QQLPGLELGL SQDGHIGVLN QQALNQIYQM GQTRMHQQQQ 300 TSKDDSQGSE GQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	7e-50	TCP family protein