PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004324.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 147aa    MW: 16492.6 Da    PI: 8.0948
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004324.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-054062123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C++ F+++  L  H++ H
  Cse_sc004324.1_g010.1 40 YTCNFCKRKFNSPQALGGHQNAH 62
                           9*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MNIREGISPE YLNAYQKGWL NLTLGENLVD SSPLRPMKAY TCNFCKRKFN SPQALGGHQN  60
AHKRERQAAM NHMVKLSLGV QAHTPSRDDE TTIARFVDGG ARYEATLVQP CVGEETVDLK  120
WPEGFYSEAH APSQPSSPHR LDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.19e-13C2H2 family protein