PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004358.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 195aa    MW: 21695.2 Da    PI: 11.1253
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004358.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.8e-1491135347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Cse_sc004358.1_g020.1  91 AWTEEEHRLFLVGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKY 135
                            7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MATMPSHSFD SNGGSATSSS VNNTGKTIML FGVKLTDGGG GTFSFRKSAS MNNLAQFDHQ  60
HRDSSVNMAG YASDNVIHPS APSHDRKKGV AWTEEEHRLF LVGLHKVGKG DWRGISRNFV  120
KTRTPTQVAS HAQKYFLRRN NHNRRRRRSS LFDITTETVV TSAYGFISGI SATTTKYRKQ  180
EGKTHHAIFF GHYKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.23e-56MYB_related family protein