PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004390.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 142aa    MW: 16289.9 Da    PI: 6.6609
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004390.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000221032123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           ++C+ C+k +++  +L  H+ +H
  Cse_sc004390.1_g030.1 10 FVCKLCDKKYPSGKSLGGHMTSH 32
                           89******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MYEAHDELRF VCKLCDKKYP SGKSLGGHMT SHVLAAANSY ESDEKIMIVR MKLVKDWLPV  60
LIVCKDNVTP MLTNHKPLYL ELEETFLKII STLAMSEAQE LLQQCLSFAT RNAEDCPHLV  120
SAFTTWFRRA NRQLPVDQEQ VS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.15e-09C2H2 family protein