PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004461.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family VOZ
Protein Properties Length: 433aa    MW: 47857.4 Da    PI: 4.686
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004461.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ377.34.7e-1161813991217
                    VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataks 88 
                            pppsaflgpkcalwdc+rpaqg  w+ dycss+ha  a  eg+pg++pv+rpkgi+l d+ll+a+lsak+qgk+vg+pecegaat+ks
  Cse_sc004461.1_g010.1 181 PPPSAFLGPKCALWDCPRPAQG-GWCPDYCSSLHAGNAQTEGMPGMKPVVRPKGIELNDNLLVASLSAKTQGKNVGVPECEGAATTKS 267
                            89********************.6**************************************************************** PP

                    VOZ  89 pwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeine 176
                            pwna+e+fd+s++egetirewlffdkprrafesg rkqrslpdy+grgwhesrkq+++e g lk+syymdpqp++++ewhl+ ye+++
  Cse_sc004461.1_g010.1 268 PWNAPEFFDISMFEGETIREWLFFDKPRRAFESGTRKQRSLPDYDGRGWHESRKQLLNESGWLKKSYYMDPQPMQHLEWHLFVYETSQ 355
                            **************************************************************************************** PP

                    VOZ 177 ldalalyrlelklvdekksakg...kvskdsladlqkklgrlta 217
                            +da+alyrlelk+vd+k s kg   k+ +dsl++lqk++++lta
  Cse_sc004461.1_g010.1 356 CDAYALYRLELKVVDGKTSKKGlkkKIDNDSLTELQKQMSQLTA 399
                            ***************98777654439****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MGKGTEYRKL KETAKVRVED LQDKFTRLQY ASNEGAIDVA VLQEEVSQIL KDWNNELNQP  60
SPASSLQQQG SSLGFSSLER LLEPLDEEDD ATSGLTPLKA ELHAHETGQS APSYEDLIGQ  120
YNVDPSGFAT AGADCTTANT TGLDNISFDL PQDFGLDYST GLDFLDYDQG EGFLPEVTGP  180
PPPSAFLGPK CALWDCPRPA QGGWCPDYCS SLHAGNAQTE GMPGMKPVVR PKGIELNDNL  240
LVASLSAKTQ GKNVGVPECE GAATTKSPWN APEFFDISMF EGETIREWLF FDKPRRAFES  300
GTRKQRSLPD YDGRGWHESR KQLLNESGWL KKSYYMDPQP MQHLEWHLFV YETSQCDAYA  360
LYRLELKVVD GKTSKKGLKK KIDNDSLTEL QKQMSQLTAE FPVDSGNKTS VKGRGKPNLK  420
AKGSFIEPNN TSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-122VOZ family protein