PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004469.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1026aa MW: 116341 Da PI: 6.0009

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004469.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	23.6	1e-07	906	938	2	34
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKr 34 +k++s e++++++ +++k+AAkeLgv++++LKr Cse_sc004469.1_g040.1 906 KKNLSREEIERHYGKTMKEAAKELGVSVSTLKR 938 79******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1026 aa Download sequence
MANWFPKEGP SGFLESFPTY RLHSKPRSRF NGLWVFSSKD EGYESNSYSS DDAGTLMMIR 60 AKILSAFSKI DNDLHVLIAQ FWAPVTIGGK LQLSTSGQPF AVSYLGSSFK KYRRLRVEYP 120 YDSKFKGTPV SAFLNRFPKI TSTSTSVHET DPLLRYAPKC GLDSSFMMRI YCPSQTSSSC 180 DCIGVIECSS WFTKCTDIFI EMNTKIKEVG LGVYNLQDHI PYKTINGLKL ARDQIQEALK 240 IVCQSHQIAL AQVWIASLDE NYIQFSSSWE EAQTRQLLGL KLTGYKNIDE DSIDEHNEER 300 CCFFQNYYDA CDLIPLPPGE EFILKTLQDY EPRFCKNILE LGIYELMGLD QYDAIDGYKE 360 IKFDIFQSKR LSPIPEALKE GKKQVAVDYI APLATKCKPA PFLTPQQVIE QQFEISTTEI 420 FLGXPPPPPQ RITTSAENIF GNGNLMADRD DERLSEFLET FPTYIPYKTP ETEGAFWIFC 480 SKDEGSHNIS SLGDLGTRMI HDKLKSAFSK VSNSGELIVQ FWAPITSGNR LVLSTSGQPF 540 AVSVFGEGLE EYRGRCVGYE CNIDMNNDNN KVIKDDIEQH EDHHPMTMIS GPPTNSFLNR 600 LPEAVLDTKN HHEGSLMRYA SDCGLWTSYT LPIGCPQYYS SCIGVVECSS ISSINLEIVN 660 TMNRALEQEG LNVFNVQDRI PYNTINGLTL VRDEIQVALK SVCESHKIGV AQDTQTTRRL 720 ALKLTGYNSV DEDSTVSNWR FKEYYDACDM VPLKKGEELV EKTLQDYQPR FCENISQLGT 780 DTLMGWVSTD DVACSGFTIC TSIDTGDFNC AFEFIWLHNP NYVLLLETLL LTLKRCLPRF 840 NFASGAELGD QLHVIDVDNS TKSETKFFKI FKEKRLSPIP EAIDKGKKAI VVNYNTRSKR 900 KRDTTKKNLS REEIERHYGK TMKEAAKELG VSVSTLKRWH NNLCKSGWQG PDLLQRKAYN 960 SNKNQSKESH THEKNNGVIQ DPSPVKKHEN TVFKAEYADD KIILHLPISE ATFVTVKNEI 1020 GERFKL

Sequence ? help Back to Top

Protein Sequence Length: 1026 aa Download sequence

MANWFPKEGP SGFLESFPTY RLHSKPRSRF NGLWVFSSKD EGYESNSYSS DDAGTLMMIR  60
AKILSAFSKI DNDLHVLIAQ FWAPVTIGGK LQLSTSGQPF AVSYLGSSFK KYRRLRVEYP  120
YDSKFKGTPV SAFLNRFPKI TSTSTSVHET DPLLRYAPKC GLDSSFMMRI YCPSQTSSSC  180
DCIGVIECSS WFTKCTDIFI EMNTKIKEVG LGVYNLQDHI PYKTINGLKL ARDQIQEALK  240
IVCQSHQIAL AQVWIASLDE NYIQFSSSWE EAQTRQLLGL KLTGYKNIDE DSIDEHNEER  300
CCFFQNYYDA CDLIPLPPGE EFILKTLQDY EPRFCKNILE LGIYELMGLD QYDAIDGYKE  360
IKFDIFQSKR LSPIPEALKE GKKQVAVDYI APLATKCKPA PFLTPQQVIE QQFEISTTEI  420
FLGXPPPPPQ RITTSAENIF GNGNLMADRD DERLSEFLET FPTYIPYKTP ETEGAFWIFC  480
SKDEGSHNIS SLGDLGTRMI HDKLKSAFSK VSNSGELIVQ FWAPITSGNR LVLSTSGQPF  540
AVSVFGEGLE EYRGRCVGYE CNIDMNNDNN KVIKDDIEQH EDHHPMTMIS GPPTNSFLNR  600
LPEAVLDTKN HHEGSLMRYA SDCGLWTSYT LPIGCPQYYS SCIGVVECSS ISSINLEIVN  660
TMNRALEQEG LNVFNVQDRI PYNTINGLTL VRDEIQVALK SVCESHKIGV AQDTQTTRRL  720
ALKLTGYNSV DEDSTVSNWR FKEYYDACDM VPLKKGEELV EKTLQDYQPR FCENISQLGT  780
DTLMGWVSTD DVACSGFTIC TSIDTGDFNC AFEFIWLHNP NYVLLLETLL LTLKRCLPRF  840
NFASGAELGD QLHVIDVDNS TKSETKFFKI FKEKRLSPIP EAIDKGKKAI VVNYNTRSKR  900
KRDTTKKNLS REEIERHYGK TMKEAAKELG VSVSTLKRWH NNLCKSGWQG PDLLQRKAYN  960
SNKNQSKESH THEKNNGVIQ DPSPVKKHEN TVFKAEYADD KIILHLPISE ATFVTVKNEI  1020
GERFKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	832	836	TLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	4e-12	Nin-like family protein