PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004497.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 218aa    MW: 24269.3 Da    PI: 7.5374
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004497.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding507e-161661147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+  G ++W+ I + ++ gR++k+c +rw + 
  Cse_sc004497.1_g030.1 16 KGSWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCGLRWCNQ 61
                           799*****************************.***********985 PP
2Myb_DNA-binding47.73.6e-1570112347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc004497.1_g030.1  70 PFTPHEDDVILHAHLIHGNK-WSIISKLLP-GRTDNAIKNHWNST 112
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MTSSSSNDDV NLLKKKGSWT PEEDAKLIQL VETQGARNWS VIGSSIPGRS GKSCGLRWCN  60
QLSPNVQHRP FTPHEDDVIL HAHLIHGNKW SIISKLLPGR TDNAIKNHWN STLRRRGLTR  120
SSESESTQSD DNEGLKNKRR RCVSVSVSDV SSCDEMTLLT LLPPGDDGEK KKDGDDEGTC  180
LVDVMKRMIA KEVRSYVDAL RAKDCLSFGP VLHHDPIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.12e-43MYB family protein