PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004497.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 303aa MW: 33893.8 Da PI: 5.2358

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004497.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEd +l+++v+ +G ++W+ I ++ gR k+c++rw + Cse_sc004497.1_g050.1 15 KGSWTPEEDAKLIQLVETHGARNWSVIWLSIP-GRFSKSCRLRWCNQ 60 799***************************.*********985 PP
2	Myb_DNA-binding	48.4	2.2e-15	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc004497.1_g050.1 69 PFTPHEDDFILRAHVIHGNK-WSVISKLLP-GRTDNAIKNHWNST 111 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MMSSSNDDVN LLKKKGSWTP EEDAKLIQLV ETHGARNWSV IWLSIPGRFS KSCRLRWCNQ 60 LSPNVQHRPF TPHEDDFILR AHVIHGNKWS VISKLLPGRT DNAIKNHWNS TLSCDGMSVL 120 TLLPPGNGEK KKRGDDEVEK EIEDTCLVDV MRKMIAKEVR SYIDELRAKD GLSFGPVLSH 180 ESDSSSKGKE KMVQVLAERE VAGKKIEWAM FVMVYVVLSN PNNAFAGCYR PTFPNSITCP 240 GSSSNYVMPP PDLNQYNSQN NPHLGQNDHV DNNDLNNNDD NSEDNNEAGD ESGSDSGGGF 300 FEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	157	KKKRGDDEVEKEIEDTCLVDVMRKMIAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-45	MYB family protein