PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004501.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 153aa MW: 18002.8 Da PI: 10.1118

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004501.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	55.3	1.3e-17	4	47	6	49
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 s +++s+yF++p+++AAk+ +v+ ++ K CR GIk WP+Rk+ Cse_sc004501.1_g110.1 4 SRDVISNYFHMPLHQAAKCFNVGSSLFKVHCRSVGIKSWPYRKL 47 6789***************************************8 PP
2	RWP-RK	50.5	4e-16	55	103	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + s +++s+yF++p++ AAk+ +v+ ++ K CR Ik WP+R + sl Cse_sc004501.1_g110.1 55 SFSRDVISHYFHMPLHRAAKCFNVGSSLFKVHCRSVEIKSWPYRELLSL 103 456789**************************************99775 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MSFSRDVISN YFHMPLHQAA KCFNVGSSLF KVHCRSVGIK SWPYRKLLTQ SKTMSFSRDV 60 ISHYFHMPLH RAAKCFNVGS SLFKVHCRSV EIKSWPYREL LSLEKLINYF QDKDGDSNTN 120 ENMQEIITKL QEEKRRIKED PELAITNNTK KLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74480.1	3e-21	Nin-like family protein