PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004508.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 277aa    MW: 31676.4 Da    PI: 7.8955
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004508.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.41.4e-321972255
                G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           prlrWtp+LH++Fv+a+e+LGG+ekAtPk +l+lm+v gLt++hvkSHLQ+YR+
  Cse_sc004508.1_g030.1 19 PRLRWTPDLHQSFVHAIERLGGPEKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72
                           8****************************************************7 PP
2Myb_DNA-binding49.41.1e-152071148
                           TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                           r+rWT+++++ +v+a+++lGg+   t+k++ + m   g+t  ++ks++q+y+
  Cse_sc004508.1_g030.1 20 RLRWTPDLHQSFVHAIERLGGPekaTPKLVLQLMDvRGLTISHVKSHLQMYR 71
                           89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGSCGRNGAV RQYVRSKIPR LRWTPDLHQS FVHAIERLGG PEKATPKLVL QLMDVRGLTI  60
SHVKSHLQMY RSMRSDGDCK QEDEDPNFIG SHRRQSLEDH HDGCLDHEHH LKSNIFQDSH  120
SHIFYTLPSK RGRMETRNGK HEWWKNASAG DREKEETVRN LTWQLHPHFL LHPCFTHVNV  180
NALHPESDFL KIFEKGDGEC GSYKKRKLEG PRTSQEEDKY AIPLTLSLHH PSTQRSSINC  240
SSTSEISEVH SRPDVNDGSS NKCSVNLDLS VGLCGNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.14e-33G2-like family protein