PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004531.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 212aa MW: 24403.9 Da PI: 7.3435

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004531.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.1	1.2e-16	76	160	8	92
-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 8 sdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 + + +++ l+lpkkf+ g++ e+ t++l++++g++We+ ++ +k+ + y+l+ GW++F + n+L egD +vFk++ ++++ + Cse_sc004531.1_g010.1 76 PKTKTHDVLRLPKKFV-GLpGIDR-EG-TIILKNQDGKEWEMGVRLDKSYWTerYILSPGWRKFKRCNRLTEGDECVFKFITTESKLC 160 56678899******.5536664.43.9***********9977653345***********************998755544 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MVLVKDADLQ FGDMLVFWLV NDSAFKVTIY TANECGKILP PRNKDVKLED EVEDEDGDCN 60 DGPDVDHDPY FVVIIPKTKT HDVLRLPKKF VGLPGIDREG TIILKNQDGK EWEMGVRLDK 120 SYWTERYILS PGWRKFKRCN RLTEGDECVF KFITTESKLC LAKVTKKKPA TEAVKRTDLG 180 LQTRQHGGRV DVESEDEFVE VVKRGRGRQR KQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24645.1	5e-12	B3 family protein