PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004531.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 256aa    MW: 29305.2 Da    PI: 7.1651
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004531.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.21.2e-1217931694
                           EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                     B3 16 lvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                           l lp  f++ + +  ++ +k+ ++++   g +W+vk+  +k +++y +++GW++ +k+ +L   Df++F+l+++s+f++++
  Cse_sc004531.1_g030.1 17 LPLPSAFVTMYlK--NNIPKDPKIRSaNGGYVWKVKI--KKIDESYCFANGWSKVAKDAQLGLADFLIFELVNESTFKMKI 93
                           789*****99953..357777888884566*******..*********************************999997765 PP
2B354.62e-171302091190
                            HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                            + ++ l+lp +f+    g++  e+ t++++++sg++W++ ++ + +  +  y+l++GW++F + n+L egD +vFk+++++++
  Cse_sc004531.1_g030.1 130 SHKSVLRLPENFV-GLpGIDR-EG-TIMMKNLSGKEWRMGIRLDTSFWTehYYLSTGWSKFRQHNKLSEGDKCVFKYIRSEKK 209
                            3445699*****9.5536664.43.9***************8755432255***************************96444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAPSCFKILL DPASPHLPLP SAFVTMYLKN NIPKDPKIRS ANGGYVWKVK IKKIDESYCF  60
ANGWSKVAKD AQLGLADFLI FELVNESTFK MKIYTPNGCE KFLTSRNHVE HKSDEHDGDD  120
PFFVSIISKS HKSVLRLPEN FVGLPGIDRE GTIMMKNLSG KEWRMGIRLD TSFWTEHYYL  180
STGWSKFRQH NKLSEGDKCV FKYIRSEKKL CLAKVTKQDS DNEGYEEKEG TSTTSADRNP  240
QTDKKDSNVD LEEEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-15B3 family protein