PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004533.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 330aa    MW: 37184.7 Da    PI: 9.1016
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004533.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.62.5e-53151421128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yLkkk+++ +l++  +i+evd+yk++Pw+Lp+k+  +++ewyfFs+rd+ky++g r+nra++sgyWkatg+
  Cse_sc004533.1_g040.1  15 LPPGFRFHPTDEELVVHYLKKKASSVPLPV-AIIAEVDLYKFDPWELPSKAIFGDQEWYFFSPRDRKYPNGMRPNRAATSGYWKATGT 101
                            79****************************.88***************7777899********************************* PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk++ls+ ++++vg+kk Lvfy g+ pkg kt+W+mheyrl
  Cse_sc004533.1_g040.1 102 DKPILSStGDQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
                            *****9978889***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MESTDSSTCS QYPNLPPGFR FHPTDEELVV HYLKKKASSV PLPVAIIAEV DLYKFDPWEL  60
PSKAIFGDQE WYFFSPRDRK YPNGMRPNRA ATSGYWKATG TDKPILSSTG DQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLADSTSFKS PTMNLSSKKG SLRLDEWVLC RIYKKNTANR  180
PMERDTGNDY MENILASKTA NSNGINEHNQ ETYFEIMNNE DGSRIRQTNN MSKMGSSNSS  240
LKSGVSSMVM NHGKRSFPTT TTHYWNIETS EKRFHADEDI NGMMDGNASF ISLLNPTQQV  300
GISGFHPNAV LGSLGDSTFP YQLSSLNWHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-101NAC family protein