PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004540.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 659aa    MW: 76521.5 Da    PI: 5.9022
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004540.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.65.7e-41211541127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                            lppGfrFhPtdeel+ +yL++k ++ +      +  ++i++vd+yk+ePw+Lp+ +  ++kewyfF++rd+     +      ++gyW
  Cse_sc004540.1_g070.1  21 LPPGFRFHPTDEELIIHYLCHKSRSMEpfasvASPPSIIADVDLYKHEPWELPELAMFGTKEWYFFTPRDTFIGLPSSGLAHCRNGYW 108
                            79*********************999977654222348***************76667899***********9977777777889*** PP

                    NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                            katg dk+++sk   + +vg+kk Lvfy g+  kg kt+W+mheyr
  Cse_sc004540.1_g070.1 109 KATGADKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 154
                            ***********9666677***************************8 PP
2NAM158.52.6e-493214541127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee...vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                            lppGfrFhPtdeel+v+yL +k ++ +         +   +i++vd+yk+ePw+Lp+ +  ++kewyfF++rd+ky++g+r+nr+t +
  Cse_sc004540.1_g070.1 321 LPPGFRFHPTDEELIVHYLSHKSRSMEpftsvA---SppsIIADVDLYKHEPWELPELAMFGTKEWYFFTPRDRKYPNGSRPNRVTGN 405
                            79*********************9999775542...14438***************76667899************************ PP

                    NAM  81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                            gyWkatg dk+++sk   + +vg+kk Lvfy g+  kg kt+W+mheyr
  Cse_sc004540.1_g070.1 406 GYWKATGADKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 454
                            **************9666677***************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MRTPTKHVTK TARDAEAELN LPPGFRFHPT DEELIIHYLC HKSRSMEPFA SVASPPSIIA  60
DVDLYKHEPW ELPELAMFGT KEWYFFTPRD TFIGLPSSGL AHCRNGYWKA TGADKPIKSK  120
SDPKVTVGIK KALVFYAGKG TKGIKTNWIM HEYRRNKHSK LDDWVLCRLY NKKNNPKEMI  180
IPQEDDSICH SNDLRVTSPL DELQSGQSYS DISDNLDSFE YSDGEFSCKN EVDVMFLDDL  240
RRPQVKDTIE RHDTGLMESL MQKEDFEDGN EWFDSLSLED MHHCLEAIPS NHDIYEMPMM  300
YQPNHQHFFQ LARDAEAELN LPPGFRFHPT DEELIVHYLS HKSRSMEPFT SVASPPSIIA  360
DVDLYKHEPW ELPELAMFGT KEWYFFTPRD RKYPNGSRPN RVTGNGYWKA TGADKPIKSK  420
SDPKVTVGIK KALVFYAGKG TKGIKTNWIM HEYRHPAPSK LDDWVLCRLY NKKNNPKEMI  480
IPQEDNSICH SNDLRVTSPL DELQSGQSYS EISDNLDTFE YSDVEFSCKN EDNVIFLNDL  540
RPQVKSNSER RDTGLMESLM QKEELDDGNE WLDGLSLEDL HHCLEAIPSN HDIYEMPMMY  600
HQPNHQHFFQ LGILFIHVNI IGFLRSVYIF LFNILEKYRC NKICSHMYKD FVNIHILVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.18e-68NAC family protein