PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004549.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 198aa    MW: 22031.9 Da    PI: 8.3416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004549.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-18555155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                           ++++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  Cse_sc004549.1_g020.1  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRIWLGTFETAEAAARAYDQAAILMNG 55
                           59*****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MVHSKKFRGV RQRQWGSWVS EIRHPLLKRR IWLGTFETAE AAARAYDQAA ILMNGQSAKT  60
NFPMTNKNHS DNINNNEDNN SEASQTTEIP AAILAAKLRK CCKDPSPSLT CLRLDSDNSH  120
IGVWQKRPGK GSGSGWVMKV ELGGRRKEGI VVEPPSPVVK DGGPGDQEID EENRVVMQMI  180
EELLNWDSTP PSLCIVNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.16e-61ERF family protein