PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004572.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 242aa    MW: 27990.2 Da    PI: 6.0979
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004572.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.2e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT eEd +l+++++++G g+W++ ++  g+ R++k+c++rw +yl
  Cse_sc004572.1_g010.1 14 KGPWTREEDHILINYINMYGHGNWRALPKLAGLLRCGKSCRLRWTNYL 61
                           79******************************99************97 PP
2Myb_DNA-binding53.74.7e-1767112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg+++teE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l
  Cse_sc004572.1_g010.1  67 RGNFSTEEEETIIQLHAALGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVRAPCCERM GLKKGPWTRE EDHILINYIN MYGHGNWRAL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF STEEEETIIQ LHAALGNRWS AIAARLPGRT DNEIKNVWHT HLKKRVNEAE  120
NKCHISNFQQ QTHNLKEEDP ESSPSSSSKP FSGRDQMNCS QLNSPQHSYS EISSVITNDN  180
GDINVMGNSQ ETDEDFWTEI FSSEISSQFT TVEEGYKYKS SMNDDMQFWF NVFTRGDELL  240
EM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-78MYB family protein