PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004576.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 655aa MW: 71850.2 Da PI: 9.8893

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004576.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	98	6.5e-31	295	348	7	60
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC s++tkfCyynnys+sqPryfCk CrryWt+GGa+rn+P g+ rk+ + Cse_sc004576.1_g030.1 295 SCPRCSSSKTKFCYYNNYSVSQPRYFCKDCRRYWTHGGAIRNLPNNGTNRKRGR 348 7**********************************************9999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MGGGFDMESL VDATAGAIGS LASTTILYPL DTCKTKYQAE LRTPHLRKYK NLSDVLWEAI 60 RKRQVLSLFQ GLGTKNLQSF ISSFIYFYGY SFFRKMYIEK SGYKSIGTRA NLLIAAVAGA 120 CTVAITQPLD TAASRMQTSE FGKSKGLWKS LCEDSWEEAF DGLGISILLT INPAIQYTAF 180 DQLKQRLLDG QIGNPQSLSA LNAFLLGAAS KCAATCLTYP AIRYILLYVT NVNRSPHAMS 240 EKADMVKATK YVCWHPANIR ENQKIVHKMS DKQSGKRPQQ LLNYPRDPPP FAPPSCPRCS 300 SSKTKFCYYN NYSVSQPRYF CKDCRRYWTH GGAIRNLPNN GTNRKRGRET SASSSSQSAL 360 PTARSIGSRD VPAGSNTSQF LLSQHSGLLY PALAPKSWST GSPNNPAGGG TGSSMGGGTF 420 RLPINETNQF FTGGGFFNQT TFMFRPDAEL GAVNNAFGAA NAHFVGEAPP QPVPPSPLLH 480 HLSPVGVSCE LGFPFLQPPQ HQLIPSPPPT AWATQNMARN SVNTNNLIPK ARETTAAGNV 540 VSINEWPEFD DMDIEGGPLQ SYKCKVMIQA AESSDNEDDE SEVKSRKTVL GALSAIWKKE 600 GLLGFFKGLR AQILKTVLSS ALLLMIKEKI TKSTWVMFLA IKRFMFLSRS KLKSS

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MGGGFDMESL VDATAGAIGS LASTTILYPL DTCKTKYQAE LRTPHLRKYK NLSDVLWEAI  60
RKRQVLSLFQ GLGTKNLQSF ISSFIYFYGY SFFRKMYIEK SGYKSIGTRA NLLIAAVAGA  120
CTVAITQPLD TAASRMQTSE FGKSKGLWKS LCEDSWEEAF DGLGISILLT INPAIQYTAF  180
DQLKQRLLDG QIGNPQSLSA LNAFLLGAAS KCAATCLTYP AIRYILLYVT NVNRSPHAMS  240
EKADMVKATK YVCWHPANIR ENQKIVHKMS DKQSGKRPQQ LLNYPRDPPP FAPPSCPRCS  300
SSKTKFCYYN NYSVSQPRYF CKDCRRYWTH GGAIRNLPNN GTNRKRGRET SASSSSQSAL  360
PTARSIGSRD VPAGSNTSQF LLSQHSGLLY PALAPKSWST GSPNNPAGGG TGSSMGGGTF  420
RLPINETNQF FTGGGFFNQT TFMFRPDAEL GAVNNAFGAA NAHFVGEAPP QPVPPSPLLH  480
HLSPVGVSCE LGFPFLQPPQ HQLIPSPPPT AWATQNMARN SVNTNNLIPK ARETTAAGNV  540
VSINEWPEFD DMDIEGGPLQ SYKCKVMIQA AESSDNEDDE SEVKSRKTVL GALSAIWKKE  600
GLLGFFKGLR AQILKTVLSS ALLLMIKEKI TKSTWVMFLA IKRFMFLSRS KLKSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21050.1	8e-21	Dof family protein