PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004578.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 165aa    MW: 19292.7 Da    PI: 4.4705
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004578.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26038.33.7e-1271118247
                 DUF260   2 CaaCkvlrrkCakdCvlapyfpaeq..pkkfanvhklFGasnvlkllk 47 
                            CaaC+++r++C++d  lapyfp++q  p +++nvhkl   + v + l+
  Cse_sc004578.1_g030.1  71 CAACRYKRQRCPPDSSLAPYFPDDQnkPDQTQNVHKLNELAIVNQRLA 118
                            **********************9775579*******987777766665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MFVLKTRLED VIKQVREAAR ELVYVKELLV ELKVAYGVQN QNEIINDHDE FDFEYLDNQS  60
SLRKDPIKPV CAACRYKRQR CPPDSSLAPY FPDDQNKPDQ TQNVHKLNEL AIVNQRLAFY  120
KPAESGVQNQ NEIINDEEFC MKDLDDLRAA FYLDDILDHD DQIGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.11e-09LBD family protein