PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004625.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 231aa    MW: 26669.5 Da    PI: 9.6929
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004625.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.57.1e-297315545128
                    NAM  45 wdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            wd+    k +e+ewyfF++r+kk+ +g r+nr+tk+g+Wk tg+d++++s   ++++ glkktLvfyk rap g+ktdWvm eyrl
  Cse_sc004625.1_g010.1  73 WDMS---KIGEREWYFFVPRNKKHGNGGRPNRTTKNGFWKPTGSDRKIFSLsdTSKHLGLKKTLVFYKDRAPGGHKTDWVMSEYRL 155
                            5554...45889************************************998768888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGTLERLCGI SAQGSESWLV LTPVSAPLGQ ESCRSYSLWD GQWLWMDITT FEINAHLEIE  60
CRTNAGADGS TWWDMSKIGE REWYFFVPRN KKHGNGGRPN RTTKNGFWKP TGSDRKIFSL  120
SDTSKHLGLK KTLVFYKDRA PGGHKTDWVM SEYRLPDSCP LPKRLLAMAN SLVQAWKQRW  180
YIHSSDRLRN MFAARLDTDS DRLRNMFAAR LDADSLNRIF ITCQVFPIII W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.17e-46NAC family protein