PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004641.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 259aa    MW: 29849.5 Da    PI: 9.1944
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004641.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1262.9e-0819100790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                            A+++GF ++k ++k+    g  ++ ++ Cs++g +++e  + ++ +r++++ +++C  +l  +  k ++ w +      HnHe++
  Cse_sc004641.1_g030.1  19 AESIGFLIVKGRTKTD--RGYKYSIELLCSRNGISAREGLE-DELERQTSTAKINCPFRLLANFIKrQNGWILRVKCPRHNHEFV 100
                            899********98888..6667****************999.8888899999**********999978889888888*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKVVFGTEVA LTDWVKSTAE SIGFLIVKGR TKTDRGYKYS IELLCSRNGI SAREGLEDEL  60
ERQTSTAKIN CPFRLLANFI KRQNGWILRV KCPRHNHEFV DSFHGFSQAM RLKEIDRTAC  120
IANRQSIVCL PLRDDPDTTQ TLTLVVLLRV GENHGAHFLL TVLDENSHSR IITRYGDGTE  180
MTQPRDGHIC LLNDRGCLER HRKQLLIYIM RQENPFLCRC RRGFIIERTS QQPKTCGLKY  240
YACPLSKPGT KDYGCRYFM