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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Cse_sc004666.1_g010.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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| Family | B3 | ||||||||
| Protein Properties | Length: 2033aa MW: 229476 Da PI: 3.9286 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 36.6 | 8.2e-12 | 181 | 265 | 6 | 91 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
t s+ ++ l++p + ++ +++++ t+tl++ +g +++ v ++ks+ry+ ++GWkeF ++n++ egD +vFk++ ++++
Cse_sc004666.1_g010.1 181 T-SSKRNKYKLRFPPELVALTKINNK--ETITLKNDDGyeKQMPVCSDKQNKSKRYYVAEGWKEFQRSNDISEGDECVFKFITSEDKL 265
3.444444559999999866666643..489999999955666666666999999*************************99765554 PP
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| 2 | B3 | 36.1 | 1.2e-11 | 350 | 436 | 5 | 90 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89
++s+++++ l +p +f++ g++++e t+tl++++g ++ v+l+ + ++ +y+l++GWkeF + ++ gD +v k++ + ++
Cse_sc004666.1_g010.1 350 IMTSSNTNQYKLPFPADFVALAGINTKE--TITLKNLDGheTKFPVRLNKQYSRTSYYLGAGWKEFQRNTNISKGDKFVVKFITSeDK 435
57889999999********777877555..78888888844666667755666666*************************9976344 PP
E CS
B3 90 f 90
f
Cse_sc004666.1_g010.1 436 F 436
4 PP
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| 3 | B3 | 32 | 2.2e-10 | 520 | 607 | 7 | 90 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88
+s+++++ l+++ +f++ g++++e t+tl++++g ++ v+ k+ +y+l++GWkeF + ++ egD +vFk++ + +
Cse_sc004666.1_g010.1 520 TSSNSNQYSLWFSTNFVALAGINTKE--TITLKNLDGyeKKLPVRSHKhrkLKHLTQYYLGAGWKEFQRNTNVSEGDKFVFKFITSeD 605
67788888899999**9666777544..89999999977555555432222666666*************************997634 PP
EE CS
B3 89 ef 90
+f
Cse_sc004666.1_g010.1 606 KF 607
44 PP
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| 4 | B3 | 32.8 | 1.3e-10 | 1015 | 1107 | 1 | 94 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkl 84
ff v++++ ++ks+ l+lp +f++ g++++e +++++++ ++ ++ ++ +k+ + y l+ GW F ++n++ +gD +vFk+
Cse_sc004666.1_g010.1 1015 FFVVTITPTSHKSK-LRLPTDFVALAGIESKE--NIIMKSLDENETQMSIQTDKRFRLtqYHLSVGWPAFKQSNNISDGDECVFKY 1097
78888899999998.********666766555..5777777776666666444433324599************************ PP
-SSSEE..EE CS
B3 85 dgrsefelvv 94
+ ++++ ++
Cse_sc004666.1_g010.1 1098 ITSEDKMCLA 1107
9877765555 PP
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| 5 | B3 | 31 | 4.4e-10 | 1514 | 1600 | 2 | 90 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkld 85
f v++++++ + l+lp +f+e g++ ++k ++++ ++g++ ++ l+ ++ ry l+ GW+ F ++n++ egD ++Fk++
Cse_sc004666.1_g010.1 1514 FVVTITPSHKA--KLRLPPDFVELAGID--GKKNIIIKCPDGNERQMVLRSvkQGLLTRYRLSMGWSAFRRSNNISEGDECIFKYI 1595
44444444444..489******777666..56689999999999999995433444455**************************9 PP
SSSEE CS
B3 86 grsef 90
++++
Cse_sc004666.1_g010.1 1596 TSEDK 1600
86555 PP
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| 6 | B3 | 39.6 | 9.3e-13 | 1733 | 1827 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE- CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld 85
f v++++++ + +l+lp +f+ g+++++ +t+++++g + ++ ++ +++ ++ y l+kGW+ F + n+L +gD +vFk++
Cse_sc004666.1_g010.1 1733 FRVTITPYHKS--ILRLPPDFVGLAGINTKK--NITVKSLDGDESQMAVRSDRRFSSlqYHLAKGWEAFMQRNNLSQGDDCVFKYI 1814
56666666554..59*******666777555..67777777777777775544444456*************************** PP
SSSEE..EEEEE- CS
B3 86 grsefelvvkvfr 98
++++ ++ kv++
Cse_sc004666.1_g010.1 1815 TSEDKMCLAKVIK 1827
8888877777766 PP
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| 7 | B3 | 32.3 | 1.8e-10 | 1848 | 1931 | 13 | 94 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
+++l+lp +f+ g++++e +t+++++g++ ++ l +k+s ry lt GW F ++n++ egD +vFk++ ++++ ++
Cse_sc004666.1_g010.1 1848 KSMLWLPTDFVGLAGIDTKE--NVTVKSLDGNETQMALLPcpvkNKQSIRYRLTMGWPAFKRSNNISEGDECVFKYITSEDKMCLA 1931
45799*****9666777555..79999***********557777888888**************************9877765555 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 2033 aa Download sequence |
MASRQPPFFY HILMNPSSPH LPLPSNFVKK HLRNKILKDP ILKSANGGYS WKLKMKKFDD 60 DDHGFCFVNG WSKVVKDILV PKSKAPRTNV REVSVEDEVV FDDDDVEDEV VEEEEDDDVE 120 YKVRDYVEED DEDADDDEDD DVDDDDDDVE FGDDGDEDDG EDEDVDVDVD GNDGDPFFIL 180 TSSKRNKYKL RFPPELVALT KINNKETITL KNDDGYEKQM PVCSDKQNKS KRYYVAEGWK 240 EFQRSNDISE GDECVFKFIT SEDKLCLAKV TKKKTRATEV DNDDMEDDDD GMDEEGKAEA 300 AKDDDFIVDG DDIFDDDGMD EEGEGEDVKL VDYDDEDDSV DGDEGDPSFI MTSSNTNQYK 360 LPFPADFVAL AGINTKETIT LKNLDGHETK FPVRLNKQYS RTSYYLGAGW KEFQRNTNIS 420 KGDKFVVKFI TSEDKFCLAK VTKKRTLNND MDDDDSMDEE GEAEAAKDDD FIVDGDDILV 480 DDGIDDVDEE GEGEDVKLVD DDDEDDYVDG DDGDPFFIYT SSNSNQYSLW FSTNFVALAG 540 INTKETITLK NLDGYEKKLP VRSHKHRKLK HLTQYYLGAG WKEFQRNTNV SEGDKFVFKF 600 ITSEDKFCVA KITTKKTRAR PLPTAAKAPV TEVDDGIDDK DVDDNDVKDV DEDDELFDDG 660 NPSFVATITP TYNRVLRMPT GFGELAGFDT KETLTLKGLD GYEKKMPLRV DQKRYYVGMG 720 WKDILQSTTK IIKKETRARP QLPAAEAQET EFNDDDTEDD EDVEDDNDND ENEDVERVDD 780 GIDDDDDDDD DNDKDENEDV EPVDVDPVFV VNITTSHKYM LRLPPEFVEL AGIDGKKNII 840 IKCPDGNDRQ MVLRAVKQGQ STRYCLSMGW LAFKRSNNIS EGDEWVFKYI KSEDKMCLEK 900 ITKEETLATE VDNDDLKVDA IDDKDAEVND NKVDDENVEL VDDGMDDKDV NGDDNKDEDE 960 NVELVDDGMD DKDVNGDDNK DEDENAELVD NGMDVDADDN KAEDKDVELV DGNPFFVVTI 1020 TPTSHKSKLR LPTDFVALAG IESKENIIMK SLDENETQMS IQTDKRFRLT QYHLSVGWPA 1080 FKQSNNISDG DECVFKYITS EDKMCLAKIT KEKTSATPPP LAVGTPPTEV DDNDLNVDDG 1140 MDGKDVVVDD NKVEDENVEL VDDGMDDKVV NGDDNKEEDE NVELVDDGMD DKDVNGDNNK 1200 DEDENVELVD DGMDDKDVVG DKNKEEDENV ELVDDGMDDK VVNGDDNKEE DENVELVDDG 1260 MDDKDVNGDN NKDEDENVEL VDDGMDDKVV NGDDNKEEDE NVELVDDGMD DKDVNGDNNK 1320 DEDENVELVD DGMDDKDANV ELVDDGMDGK DVVVDDNKDG DENVELVDDG MDDKDVNGDD 1380 NKDTDENVEL VDDGMDDKDV NGEDNKDEDE NVELVGDGMD DKVVNGDDNK DEDENVELVD 1440 DGMNDKDVNG DDNKDEDENF ELVDDGLDGK DVVVDDNKDE DENVELAEDG MDVDADDNKD 1500 EDNDVELVDG NPFFVVTITP SHKAKLRLPP DFVELAGIDG KKNIIIKCPD GNERQMVLRS 1560 VKQGLLTRYR LSMGWSAFRR SNNISEGDEC IFKYITSEDK MCLEKITKKE TRARLPPPAT 1620 ETPPTEVDDN MDDEYAEVDD NKDKDENVEL VDDGMDDNDV DEYVKLVDGM DDKDMEFDNN 1680 KNDEDENENE NVKLVDDGMD DKDVDEYVKL VDGMDNKDED ENVELVDDRD PFFRVTITPY 1740 HKSILRLPPD FVGLAGINTK KNITVKSLDG DESQMAVRSD RRFSSLQYHL AKGWEAFMQR 1800 NNLSQGDDCV FKYITSEDKM CLAKVIKTSA TEVDADPYFV VTITPCHKSM LWLPTDFVGL 1860 AGIDTKENVT VKSLDGNETQ MALLPCPVKN KQSIRYRLTM GWPAFKRSNN ISEGDECVFK 1920 YITSEDKMCL AKVTKEKTQT RLPSPAEVVK RKRGQLPPVT VIKMTAAETV KMRSRRPPPV 1980 EITVAEAVKR KRGQPPPSSP RVTKDMKRKK GQPHVHSAEG VEVTKKPRGR PAK |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 1989 | 2010 | KRKRGQPPPSSPRVTKDMKRKK |
| 2 | 1990 | 2011 | KRKRGQPPPSSPRVTKDMKRKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G26680.1 | 4e-09 | B3 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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