PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004704.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 652aa MW: 73676.9 Da PI: 8.2993

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004704.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.9	5.8e-17	498	593	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++k+ ++ + ++g + + +C+keg +++ + + +ek++r+++ + tgC+a+++++++ +gk++++k+ Cse_sc004704.1_g020.1 498 DMYSTYAEAGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGAPRHINVDtldpkhSEKQKRNTTLHVTGCQARIRLELDIvSGKYKLIKF 584 58*************99888.7887999999***9998888899998999999999***********99***** PP FAR1 82 eleHnHela 90 +HnH l Cse_sc004704.1_g020.1 585 IAKHNHMLI 593 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
LKPRRKSLKP CRNNEPPPDS LKPPPESNQT TNLAITSNTS HQTAAAGIKP PESNLLKPSP 60 SHQTVPITIE PPPINREIMP PVDETDLIEV PVDESQDKDD GVNKNTGGGN TCGLGEVSCG 120 IERHSIATHA ASCDMAWITT FFAEAAWKEM KEERRGRGSR SQPVRPQVQS QPSPYYPQMT 180 PQAGHYYPQP PPMNLPSHQH QYYPQPPPYM MSTTSDFDPF GEYRDDDEVE YVPETQQENP 240 IVEKINWTTN EEVALAKAWV HISTCRKVGN EQTRDGFWKR ILEHFKTNLK NTTRTHHSLN 300 TKWGNMNTAM GIFNGLYIQS KRLRESGCSD LDVMKNALAD YQKKTKGKDF THIEAWEVVK 360 GEDKWLEQPC VGQEASASAE KRRKSSSSSY QETGSNENVQ TSTNESIAES FNNYVISKTQ 420 ILESIAEKRS AKDDLAEKLL SAQIHSMRSP RPTLYEHTET PGGSIYWEPH VKGIVVPQEG 480 KYYDTIEEAI DMYKEAIDMY STYAEAGGFQ IKKAGQRLTK SGIVQAKYIM CNKEGAPRHI 540 NVDTLDPKHS EKQKRNTTLH VTGCQARIRL ELDIVSGKYK LIKFIAKHNH MLIPKEYKHF 600 TKKQRKMTEA EKMFVVKAAT NKIGATRAHK LLTSMKGGYE YVHGTSSDFQ NH

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

LKPRRKSLKP CRNNEPPPDS LKPPPESNQT TNLAITSNTS HQTAAAGIKP PESNLLKPSP  60
SHQTVPITIE PPPINREIMP PVDETDLIEV PVDESQDKDD GVNKNTGGGN TCGLGEVSCG  120
IERHSIATHA ASCDMAWITT FFAEAAWKEM KEERRGRGSR SQPVRPQVQS QPSPYYPQMT  180
PQAGHYYPQP PPMNLPSHQH QYYPQPPPYM MSTTSDFDPF GEYRDDDEVE YVPETQQENP  240
IVEKINWTTN EEVALAKAWV HISTCRKVGN EQTRDGFWKR ILEHFKTNLK NTTRTHHSLN  300
TKWGNMNTAM GIFNGLYIQS KRLRESGCSD LDVMKNALAD YQKKTKGKDF THIEAWEVVK  360
GEDKWLEQPC VGQEASASAE KRRKSSSSSY QETGSNENVQ TSTNESIAES FNNYVISKTQ  420
ILESIAEKRS AKDDLAEKLL SAQIHSMRSP RPTLYEHTET PGGSIYWEPH VKGIVVPQEG  480
KYYDTIEEAI DMYKEAIDMY STYAEAGGFQ IKKAGQRLTK SGIVQAKYIM CNKEGAPRHI  540
NVDTLDPKHS EKQKRNTTLH VTGCQARIRL ELDIVSGKYK LIKFIAKHNH MLIPKEYKHF  600
TKKQRKMTEA EKMFVVKAAT NKIGATRAHK LLTSMKGGYE YVHGTSSDFQ NH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-07	FAR1 family protein