PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004788.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 241aa    MW: 27086.5 Da    PI: 8.1493
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004788.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.11.8e-172065147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+W+++Ed  l+++v+q+G+++W++I++ +  gR+ k+c++rw + 
  Cse_sc004788.1_g020.1 20 KGSWSPQEDATLLKLVEQHGPRNWSLISSGVS-GRSSKSCRLRWCNQ 65
                           799*****************************.***********985 PP
2Myb_DNA-binding53.74.9e-1773116247
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                             r+T eEde +++a++ +G++ W+tI+r  + gRt++++k++w++ 
  Cse_sc004788.1_g020.1  73 SRFTLEEDEVIIRAHEAHGNK-WATISRLQP-GRTDNSIKNHWNST 116
                            69*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MTVTNDTNGG NDDGGCNKIK GSWSPQEDAT LLKLVEQHGP RNWSLISSGV SGRSSKSCRL  60
RWCNQLSPVV EHSRFTLEED EVIIRAHEAH GNKWATISRL QPGRTDNSIK NHWNSTLRHF  120
GWSKSVTTKC SFADVSTDSA QRDSGSKRHS AVRTVGCNGP ETLLSLMQPG HIKEVKEVKE  180
NKVEMVAEDD MEDKWIAGVD DTCLMTIMKR MIAEEVQTYI NSLWAKESFV FAFKPTAYKR  240
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.14e-42MYB family protein