PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004914.1_g060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 485aa    MW: 56665.1 Da    PI: 7.0054
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004914.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind85.66.9e-27121042103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            F+ kly++++d++++++isws++++sf+++de++f++++Lp+yF +s+f SF+ QL  YgF+k+  ++          eF++k+F++g
  Cse_sc004914.1_g060.1  12 FVIKLYKMVSDKDTNSIISWSSSSTSFIIFDEHRFTSEILPSYFNTSRFDSFTTQLYNYGFNKMGGRH---------LEFEQKHFQEG 90 
                            9***************************************************************9998.........78********* PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            k++ll++ikr+ ++
  Cse_sc004914.1_g060.1  91 KQHLLKTIKRRCKQ 104
                            **********9875 PP

2HSF_DNA-bind94.61.1e-292413342103
                            HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
           HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 
                            Fl+kly+++e++el++lisw+  + +sf+++d+++fa++vLp yF hsnf+SF  QLn+Y+Fkkv+ e+          e+++++F+ 
  Cse_sc004914.1_g060.1 241 FLHKLYNMVEKQELDDLISWKlPKRDSFIIWDTNKFATHVLPMYFNHSNFSSFNSQLNIYEFKKVNWER---------HEYANEWFQG 319
                            9********************9999*****************************************999.........57******** PP

                            XXXXXXXXXXXXXXX CS
           HSF_DNA-bind  89 gkkellekikrkkse 103
                            g+++ll++i r+ ++
  Cse_sc004914.1_g060.1 320 GREDLLQNITRRPKK 334
                            ***********9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
METDEFHSVA RFVIKLYKMV SDKDTNSIIS WSSSSTSFII FDEHRFTSEI LPSYFNTSRF  60
DSFTTQLYNY GFNKMGGRHL EFEQKHFQEG KQHLLKTIKR RCKQSKVVNN TPSLCVATNE  120
FKATFSKVCV GQKQIFNRIQ RFKLDMEKTL SEVQNITESL SRNPIFTFSK DIGGKRKFGD  180
LDPRIVFADI EKYLKIFYNQ FEVPESGIDD FTTLSDLTQN VAIGRGVRGG RAGGGRRVPD  240
FLHKLYNMVE KQELDDLISW KLPKRDSFII WDTNKFATHV LPMYFNHSNF SSFNSQLNIY  300
EFKKVNWERH EYANEWFQGG REDLLQNITR RPKKQQRMDN TTTCTSAEME MFTHRLKTIQ  360
QEHKSKITWI SYSEEQMRSS VDGLKEMAVN MANIANKLTL KSIENLEHVK KAKLVIEVNG  420
IGNTEGQTLE VIELGEDQSA LEENNNDVAE SFFQQLEIDF DAVEKYLQMD ETWIVQREIM  480
HYMSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195101LKTIKRR
2228236RGGRAGGGR
3229235GGRAGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54070.14e-20HSF family protein