PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004963.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 242aa    MW: 26702.3 Da    PI: 10.4398
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004963.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.8e-144792147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           r  W  +Ed +l++ v+ +G ++Wk+I+  ++ gR++k+c++rw++ 
  Cse_sc004963.1_g010.1 47 RRHWELWEDIKLKEFVACHGARDWKLISVQLP-GRSGKSCRLRWLNQ 92
                           567*****************************.***********996 PP
2Myb_DNA-binding361.6e-11102143447
                            S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +T eE + l++ ++ +G++ W+ Ia  ++ gRt++++k+ w+ +
  Cse_sc004963.1_g010.1 102 FTIEENDVLIRTHEIFGNK-WSQIATFLP-GRTDNSIKNQWHVL 143
                            899****************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MAPPSLAPTA QNGVVENPQN EVMNSSSSPK IVQKQRGTQG RENKRDRRHW ELWEDIKLKE  60
FVACHGARDW KLISVQLPGR SGKSCRLRWL NQLDPKIKKT MFTIEENDVL IRTHEIFGNK  120
WSQIATFLPG RTDNSIKNQW HVLTSLRRKN VTGASSSSAY NRHVSVDSAN NSSGSTITLL  180
GKSIVINEDR SISCMNKPAS PSAVTVAYGS GYIAGTSTFI PSGVIAPPAQ PKFIDFLGVG  240
DQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.12e-39MYB family protein