PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc004992.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 333aa    MW: 38006.6 Da    PI: 8.7762
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc004992.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.63.8e-26206255352
                 RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            +++ ledlskyF+ pi +A+k+L+v+lTvLK++CR++GI+RWPhRkiksl
  Cse_sc004992.1_g020.1 206 ASLGLEDLSKYFDVPIIQASKSLKVGLTVLKKKCREFGIPRWPHRKIKSL 255
                            57899*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAAFQSQSQS QSLKALVAFR NLICQELIRT VHLYRLESGE EEVVEREYVF HKETDYEEIS  60
FGKVFTLRKF EVSSHFEGLT NGVWLCIFVF DKDRWSVGDI DRLPTVLTIS RNRKLKTIPT  120
LANDLQTIIQ LSSESIKFEL CTSDSEEAGL GKEDKENQCK NRRRCDVDLN SLPSGLTESE  180
ESDQSATVTA DFLGKKKKRA ATKVIASLGL EDLSKYFDVP IIQASKSLKV GLTVLKKKCR  240
EFGIPRWPHR KIKSLDGLLS NLQVELARQR EEDTGAAKAV AEMQKLIESE KETIEKKPFM  300
DLQRETKKIR QDIFKKRHRA KALEGQGQTL ALF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.18e-73Nin-like family protein