PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005042.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 401aa    MW: 45558.3 Da    PI: 9.6171
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005042.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-06216236425
                            ---SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                            ++C+ fa+ G+C++G+ C++ H
  Cse_sc005042.1_g060.1 216 KPCSLFAK-GHCRFGEACRYLH 236
                            69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MTHLTTFVPI KLDVDEMNYS SWVYYFSHLC HGYGILDHLD DPPTSSSSTP PPPLTKDAEW  60
LKVDFIIRSW IFSTLVANLQ KRLVALNPKS AKEAWVCFEE IFQDHKRPRA MALKAELRNL  120
KLGDLTIDAY FQKIESIVLV SNGLSSPLSN DDIVTFVLEG LPNTYDVIST VIASREPFPD  180
LKMVHPIVDA TSASHMVLLA NSNTRRPFNP LEKVKKPCSL FAKGHCRFGE ACRYLHNGFH  240
GKSTLLPHSS SYVDMDTLQK LLTKLGFTTS PNSASATAPV AYHATTHMPQ YQLAQFTPQQ  300
AYYQPAQFMH PQPVQGFPWG VQFFDRFVRC RSNIRGSIHA RFVSCRFTKS RVQPFPGSQH  360
RFTLARGFTS RFTPARSLIF YRFTAARDFN RFTAAGVWYC L