PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005135.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 220aa    MW: 25073 Da    PI: 5.7091
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005135.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-172671148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg++T+eE e++++++  +G++ W+ Ia ++  gRt++++k++w+++l
  Cse_sc005135.1_g010.1 26 RGSFTEEENEQIIRLHSIHGNR-WSFIATELK-GRTDNEIKNHWNSHL 71
                           89********************.********9.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MNLGLLRCGK SCRLRWMNYL RPGIKRGSFT EEENEQIIRL HSIHGNRWSF IATELKGRTD  60
NEIKNHWNSH LKRKANNVGD ENQPEDSKNN RKTTKKRKTD QKSSKVKTAE IVEEIVPEPT  120
SCSLSQSAST SLRKNDSFDN GAMSGASSSS TIDQVDMDFL TTDFSWPDWS PLFEIDGTSS  180
MDCHGEFDKP LDGLDFLMKN DESEMLKKLY DECLQLIDGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-35MYB family protein