PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005157.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 185aa    MW: 21072 Da    PI: 10.2245
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005157.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.44e-0726113790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 
                            A++ GF ++k ++k+    g  ++ +f+Cs++g+ ++e  + ++ +r++ + +++C  +l  k  k       ++ w +    l HnH
  Cse_sc005157.1_g030.1  26 AQSNGFLIVKGRTKTD--RGYKYSIKFKCSRHGTYAREGLE-DELERQTGTAKINCPFRLLAKFIKgrtgttkTSGWILRVKCLRHNH 110
                            8899*******98888..6667***************9999.8888889999*****9998775543323333556777777799*** PP

                   FAR1  88 ela 90 
                            +++
  Cse_sc005157.1_g030.1 111 DFV 113
                            986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSTSPFDTQE VFGTEVALTD WVQSTAQSNG FLIVKGRTKT DRGYKYSIKF KCSRHGTYAR  60
EGLEDELERQ TGTAKINCPF RLLAKFIKGR TGTTKTSGWI LRVKCLRHNH DFVDSFHGFS  120
QAMQLKESEL VLVDQLTKHQ VAPRIILSSL KESDPNNVSS IKMVYNAQEK IRRASRGDLT  180
RYNSF