PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005166.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 463aa MW: 53728.2 Da PI: 7.2411

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005166.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1e-19	61	151	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fYn+YA++ GF+ rks+++k ++g it++ f Cskeg++ ++ + +++ +r ++++ +gC+a++ +k+++++k+ev ++e+eH Cse_sc005166.1_g030.1 61 EFYNNYARKSGFEHRKSSKNKG-KHGVITQKYFLCSKEGQNPKTYANiliEQTGKRVTTSKLIGCEAHIILKLNHKKKYEVVEFEEEH 147 6**************99998.7888*************99999999999******************************* PP FAR1 86 nHel 89 n ++ Cse_sc005166.1_g030.1 148 NRNM 151 *877 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MSYVQSENDA TDMITDDDVN QESIGNVRVT PIGSRYWTPI VPDNEKPVEK MMFDSLDQVF 60 EFYNNYARKS GFEHRKSSKN KGKHGVITQK YFLCSKEGQN PKTYANILIE QTGKRVTTSK 120 LIGCEAHIIL KLNHKKKYEV VEFEEEHNRN MARGSFDKVG ATEIDSKNYK RDVDLFIMEG 180 DAHMAIEKLE EKKELLPEFS FEFMQGEDKK LSGLFWADET AKCNYIAFGD IYFMVFVPFT 240 GIDNHKRCVT FGAGLLSNES NHMSGCSNLL RKTMSHKPKL LVTDQDLSIK IAIPKVFTTA 300 KQRLCMWHIT DKFGDKLGTT LCKSGFLQRI NDIVWSKTLT PEQFEHKWAS LMNEYGQQEH 360 KWLSNMYNIR NKWTPYFHDL PLAGLMQTTS RCEGENYFFG LLTNTDLYLV EFINHFDTAM 420 DTQRNIQRNN DHYSRYKAPL LRITFHFEKD AAEIFTAAAF KVI

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MSYVQSENDA TDMITDDDVN QESIGNVRVT PIGSRYWTPI VPDNEKPVEK MMFDSLDQVF  60
EFYNNYARKS GFEHRKSSKN KGKHGVITQK YFLCSKEGQN PKTYANILIE QTGKRVTTSK  120
LIGCEAHIIL KLNHKKKYEV VEFEEEHNRN MARGSFDKVG ATEIDSKNYK RDVDLFIMEG  180
DAHMAIEKLE EKKELLPEFS FEFMQGEDKK LSGLFWADET AKCNYIAFGD IYFMVFVPFT  240
GIDNHKRCVT FGAGLLSNES NHMSGCSNLL RKTMSHKPKL LVTDQDLSIK IAIPKVFTTA  300
KQRLCMWHIT DKFGDKLGTT LCKSGFLQRI NDIVWSKTLT PEQFEHKWAS LMNEYGQQEH  360
KWLSNMYNIR NKWTPYFHDL PLAGLMQTTS RCEGENYFFG LLTNTDLYLV EFINHFDTAM  420
DTQRNIQRNN DHYSRYKAPL LRITFHFEKD AAEIFTAAAF KVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-45	FAR1 family protein