PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005182.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 189aa    MW: 20961.8 Da    PI: 4.9216
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005182.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000451537223
                           EETTTTEEESSHHHHHHHHHH.T CS
                zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                           +C  C+++Fs+k ++ +H+r+ H
  Cse_sc005182.1_g010.1 15 PCAFCSERFSDKLSMLNHLRLiH 37
                           5*******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MSSFETSDVK TCESPCAFCS ERFSDKLSML NHLRLIHRDE IRKVYNPLHH SILNDDSIFK  60
DPSDDIAIGD NQDKWDGSFR RFGQPDLGLK VVLEEVVRDN VKLACSASIG KQIAAEEVPP  120
KDGAGLSGGQ HDMSKEGLVL SKELLDFKAL FQDIANLTEV KCLICPEVSA NLDLALAHIV  180
SVHPVSFYF