PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005219.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 240aa MW: 26657.1 Da PI: 5.8197

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005219.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.5	2e-12	17	99	11	96
HHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + l lp kf+ +++++k + ++++++ + g W+vk+ + +g++ + kGWk+ vk+ L D+++F l+++++f++++ Cse_sc005219.1_g020.1 17 DAP-YLALPHKFVMRYMEDK-IPEEVVIRSaTGGFLWNVKV--KEIKGSVRFDKGWKRVVKDACLAYEDTLLFWLVDETTFKMWIYG 99 443.489*******6664.7789*55669**..999999*************************99999998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MAVCNPPSFK KILHDHDAPY LALPHKFVMR YMEDKIPEEV VIRSATGGFL WNVKVKEIKG 60 SVRFDKGWKR VVKDACLAYE DTLLFWLVDE TTFKMWIYGT DGSEKVLAPK IHVKVEDVVD 120 VSDETVDGQD DGGDVKGSDG DGSDDGNVDG GSDGDGGYAN DNRFFTVTIS KSHKLCLGLP 180 SHFHGLPGIH HEGTITMKNL DGEEWEMGVR FRSNQNEGKL CLTRVTKKDQ TPAPRAAKVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60130.2	9e-09	B3 family protein