PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc005225.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 168aa MW: 18745.3 Da PI: 9.1231

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc005225.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	42	64	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H Cse_sc005225.1_g020.1 42 FECKTCNRQFPSFQALGGHRASH 64 89**********99999998887 PP
2	zf-C2H2	11	0.0014	87	109	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H Cse_sc005225.1_g020.1 87 HECSICGLEFSIGQALGGHMRRH 109 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MKRSREAELD TAITNMANCL MLLSGGVPSR QEPHDNPPNR FFECKTCNRQ FPSFQALGGH 60 RASHKKPRLE GDLTHGTNLA PPKPKSHECS ICGLEFSIGQ ALGGHMRRHR ATATHDKQFS 120 ASADLSNPVV KKVNSRRIFS LDLNLTPLEN DLESRFEKVV PTTIELFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	5e-43	C2H2 family protein