PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005226.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 266aa    MW: 29802.2 Da    PI: 9.1226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005226.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-122880254
                           HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                           +  hn+ Er RR+r+N+ ++ L +llP++  +++kK s   i+ +Av+YI +L
  Cse_sc005226.1_g020.1 28 KYDHNAGERDRRKRVNNLYQCLGSLLPESGDQKKKKISIPGIVSRAVKYIPEL 80
                           567*************************86777778**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MHDFAPENSM SSGISANNGG AENLVVKKYD HNAGERDRRK RVNNLYQCLG SLLPESGDQK  60
KKKISIPGIV SRAVKYIPEL EKEVEALKLE KENILPFSSP MINSRQEGLA IKNQSGEGAI  120
TKRNSWLVSS VNVLGDKEVV IQLTTLTDRM STNKENGFLS KVMENLENGE YGFVLLNATT  180
MTCSREGMVL STLHLQNVTR IAKAIYQIKG TFPRSIRNPA DEYSLMTLQL VQGDHKIESE  240
RFFNVVDVMI RCTQKAGCSW ESLRMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-18bHLH family protein