PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005338.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 247aa    MW: 27704.5 Da    PI: 8.6989
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005338.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.2e-29125185259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            +Dgy WrKYGqKe+ ++++pr YYrCt++   gC+++k+v+rs++dp+++eitY g+H+++
  Cse_sc005338.1_g030.1 125 NDGYMWRKYGQKEILNAKYPREYYRCTYRnthGCCATKQVQRSSDDPSIFEITYLGKHTCP 185
                            7***************************98889**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MNLNSSSNHH SDSNCLYSKL KKGTEQCKKL QIDLNLPASS NETEELSTHN IPNSDDEAVS  60
RYAGTLNRSE YPRQLNGRPH SDDSDTKDSN QKDASRKKKS CSSSIVKWKQ QVKVSLEIGL  120
EVPPNDGYMW RKYGQKEILN AKYPREYYRC TYRNTHGCCA TKQVQRSSDD PSIFEITYLG  180
KHTCPKLSKT NQCSSTSESG YGLINFSATP EPASKSSRTS DPSSATQSAS TITRNSFELS  240
NWPLNHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.24e-38WRKY family protein