PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005353.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 178aa    MW: 20408.4 Da    PI: 5.6461
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005353.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.94.3e-23128176149
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEE CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvve 49 
                            ldDgy+WrKYG+K +k +++pr+Y+rCt+ gC+vkk+ver+++d ++++
  Cse_sc005353.1_g010.1 128 LDDGYRWRKYGKKAIKCTPNPRNYFRCTTIGCKVKKRVERDRDDSSYII 176
                            59****************************************9998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
METCLNLSKL AQKSTMDAFL PISDRQDQTG NPNFSSSSFN CPSITNDDRV YDHTNVDNTL  60
YYNHNLTDDN SNPNTLSLID HQDSSSSNSL SYFNTNEQTP DHLLEITTDR LNDDTKIGFR  120
IQTALEVLDD GYRWRKYGKK AIKCTPNPRN YFRCTTIGCK VKKRVERDRD DSSYIIAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.13e-27WRKY family protein