PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005439.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 148aa    MW: 16299.1 Da    PI: 9.1033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005439.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-172776255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                            y+G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  Cse_sc005439.1_g050.1 27 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPIAAARAYDTAVFYLRG 76
                           69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MEAHGGCSPC SPTSSGEKRK KNDVNKPYRG IRMRKWGKWV AEIREPNKRS RIWLGSYSSP  60
IAAARAYDTA VFYLRGPTAR LNFPDSIGED GYLHDLSAAS IRKKATEVGA KVDALQTQNG  120
SASESYSGRV CLNPDLNEYP SPESSDEN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11838KRKKNDVNKPYRGIRMRKWGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.11e-51ERF family protein