PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005479.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SBP
Protein Properties Length: 142aa    MW: 16626.6 Da    PI: 9.3301
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005479.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.53.5e-4258133277
                            -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
                    SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                            Cqve+C +d+s++k+yhrrhkvCe+h+kap v++ g++qrfCqqCsrfh+l+efD++krsCrrrLa+hnerrrk++
  Cse_sc005479.1_g020.1  58 CQVEECITDMSRCKTYHRRHKVCEIHAKAPIVVIGGRQQRFCQQCSRFHDLTEFDDAKRSCRRRLAGHNERRRKSS 133
                            **************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGTRKFGRVV RRMDDNYKNE MMQEWEQEYE GTTIEDSKNK ATMGKRGSSS GGQTQPFCQV  60
EECITDMSRC KTYHRRHKVC EIHAKAPIVV IGGRQQRFCQ QCSRFHDLTE FDDAKRSCRR  120
RLAGHNERRR KSSYESYGET SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.13e-34SBP family protein