PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005510.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 242aa    MW: 27181.7 Da    PI: 8.0695
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005510.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.5e-19163213256
                    AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                            +y+GVr++  +g W+AeIrd +     r  r++lg+fgtae+Aa+a+++a+  ++ge
  Cse_sc005510.1_g010.1 163 QYRGVRQRQ-WGTWAAEIRDpW-----RkVRVWLGTFGTAEQAARAYDRAAIHFRGE 213
                            69****999.**********88.....45**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVVVLFTSVL GIVIRSSYHI APDMTLDNFS ILNAYSRCYQ AFPKNHEQSH VLRIDFECLE  60
NTNHHCSLTA DEEHSIIVST LKNVISGHTD TPITSSLLLP STSGTHTTNN KILLLSEHPV  120
EVCQVCGIIG CLGCNFFWQN APTYDGGAQQ KGGGCCGRKR KRQYRGVRQR QWGTWAAEIR  180
DPWRKVRVWL GTFGTAEQAA RAYDRAAIHF RGEKAKTNFP ECDYREQEAP PVKSKGAHEE  240
CN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-20ERF family protein