PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005510.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 180aa    MW: 20154.6 Da    PI: 7.2905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005510.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-1691138255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +ykGV+ ++ +g+W+AeI++      +kr +lg++  +eeAa+a++ a  +++g
  Cse_sc005510.1_g050.1  91 KYKGVSLKP-SGKWAAEIMVQ-----KKRKWLGTYEKEEEAARAYDMASIRYRG 138
                            8*****999.7*********3.....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MYNPSLIQLN AHEESTIVAA LSNVIGGGGH DVGPTERALV IEQPRTNNET MLQEQETCRL  60
CGTQSPDCLG CQYFEEGGGE EMRRPRRKKN KYKGVSLKPS GKWAAEIMVQ KKRKWLGTYE  120
KEEEAARAYD MASIRYRGKN AKTNFPEREY PEIQQEESGQ GNPISKVGID GDLLAKTTTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18488RPRRK
286114RRKKNKYKGVSLKPSGKWAAEIMVQKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-18ERF family protein