PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005536.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 110aa    MW: 12762 Da    PI: 11.2881
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005536.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.26.6e-261260250
                           ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
                 SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                           +ien   rqvtfskRr g++KKA+ELS+LCd++ a+i+fs tgkl+ ys
  Cse_sc005536.1_g060.1 12 KIENLASRQVTFSKRRRGLFKKAQELSTLCDVDMALIVFSATGKLFHYS 60
                           69**********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MRMVRQKTQI RKIENLASRQ VTFSKRRRGL FKKAQELSTL CDVDMALIVF SATGKLFHYS  60
PLSINQVLER RKLLPQNTGE LQQSSEEIQG LGNLLKKRIY IHTQKNLSAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.16e-33MIKC_MADS family protein