PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005541.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 224aa    MW: 25347.7 Da    PI: 5.0707
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005541.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.8e-1069117354
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            +++  rEr+RR+++N++f eL + l ++   +    +K +iL  A++ +++L
  Cse_sc005541.1_g040.1  69 ENKACRERQRREKLNERFVELSTTLEPD---RPATTDKLAILGDAIRVLNQL 117
                            56789**********************9...8899**************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDPFENTNWD LIDYNCLIND VASTDLYWAE QSAAVQIDAS LASLTPPEDG VEKECPRKRG  60
RSNSCSRAEN KACRERQRRE KLNERFVELS TTLEPDRPAT TDKLAILGDA IRVLNQLKSE  120
SQECKEMNEK LLEEIRTLKA EKIELREEKL ALKAEKAKIE QQVKSMTNSN LPPPGFMAPH  180
PAAYQAGANK MPVFPGYGYI PMWQYLPQAT CDTSHDHELR PPAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15662PRKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-54bHLH family protein